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PoPS Results
Results for search of PMAP proteome protein hs.16081 by PoPS model 'MMP16_logodds.prts'
- Disordered substrate prediction was not applied
- Sites predicted to be in N- terminal regions (<=30aa) were removed
- PFAM protein filter was not applied
- Secondary structure prediction was not applied
- Screening by protein localization was not applied
Predicted localization (site and confidence): extracellular (0.86), ER (0.12), plasma membrane (0.01)
| Position | Cleavage sequence | PoPS score |
|---|
| G118-L119 | SFGLRF | 4.503 |
| G42-L43 | SLGLLA | 0.7205 |
| S70-L71 | GTSLSP | -0.6794 |
| Q37-L38 | GQQLES | -0.7859 |
| S40-L41 | LESLGL | -0.8783 |
| A60-T61 | PAATAR | -1.06 |
| L43-L44 | LGLLAP | -2.01 |
| S91-R92 | PHSRQI | -2.138 |
| Y112-N113 | PNYNWN | -2.402 |
| G35-Q36 | PTGQQL | -2.462 |
| PFAM domain | Domain Name | Start | End | E-value |
|---|
1 11 21 31 41 51 61 71
+---------+---------+---------+---------+---------+---------+---------+---------
SUBSTRATE: MNSLVSWQLLLFLCATHFGEPLEKVASVGNSRPTGQQLESLGLLAPGEQSLPCTERKPAATARLSRRGTSLSPPPESSGS
SITES: * * * ** * *
DISORDER: ~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~
SECONDARY: ---HHHHHHHHHHHH-------EEEEE--------HHHHHHHH--------------HHHHHHHHH--------------
DOMAINS:
81 91 101 111 121 131 141
+---------+---------+---------+---------+---------+---------+----
SUBSTRATE: PQQPGLSAPHSRQIPAPQGAVLVQREKDLPNYNWNSFGLRFGKREAAPGNHGRSAGRGWGAGAGQ
SITES: * * *
DISORDER: ~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~
SECONDARY: ------------------EEEEEE-----------------------------------------
DOMAINS:
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